Weekly Schedule


BIOLOGICAL COMMUNICATIONS

Biology 3920

Fall Semester 2009



ASSIGNMENTS

  • Required HomePage Hyperlinks are High Lighted in Red and marked with an Asterisk (*).  See Schedule

  • Information/Materials Required to be Submitted as Hard Copies in your "Portfolio" include all Homepage Links (Shown in Red*) plus the Three (3) Peer Reviews of the Manuscript,  the Poster Critique Form, Seminar Evaluation Forms, Online Seminar Evaluation (Optional) and a Floppy/CD with a back-up of all required assignments.


  • Home-pages (via your URL as an attachment to an email message sent to the Instructor) along with the Folder are due no later than the last class meeting.

                         Dead-line:  Last Friday of Classes


SHORT-COURSES OF INTEREST

Information Technology Services

You can register online at the link above or from

[TTU Home Page > Computing > Training].

Handouts used in our courses are available on the web
at http://www.tntech.edu/its/pubs


Develop Spread Sheets for Recording Data and Making Figures

Beginning Excel: http://www2.tntech.edu/its/pubs/Default.htm#Excel


Developing Home-page in FrontPage 2000

FrontPage Tutorial: http://www2.tntech.edu/tutorials/FP2000/

Basic FrontPage:  http://www2.tntech.edu/its/pubs/pdf/BasicFrontPage.pdf


Developing Slide Presentation on the PC

PowerPoint: http://www2.tntech.edu/its/pubs/#PowerPoint


Online Technical Writing:
Online Textbook—Contents


 

PUBLISHING IN A SCIENTIFIC JOURNAL / ATTEND SCIENTIFIC MEETING


Want to be "Published" (be an author) in the Scientific Literature...?

present your research paper before the   


Tennessee Academy of Science [TAS]


Collegiate Division Meeting

 

TAS Collegiate Division Website


Student Travel Awards


Council on Undergraduate Research Biology Division Student Travel Awards


The Biology Division of the Council on Undergraduate Research (CUR) is
offering a limited number of travel grants (up to $250 each) for
undergraduate students presenting original research results at a
regional or national, discipline-specific meeting .

Award recipients are required to acknowledge CUR for support of their
travel in their talk or on their poster. Criteria for Eligibility can be
found at: http://www.cur.org/biostudenttravel.html

Deadline: Applications must be received by 5 pm PST September 1st for
meetings held July - December 2009 or by 5 pm PST March 1st, 2010 for
meetings held January - June. 2010. Award decisions will be made as
quickly as possible after the appropriate deadline. Send Application
Materials: by email to ahernrin@up.edu and fax receipts (only) to A.
Ahern-Rindell/Biology 503 943-7784



ORGANIZATIONS & CLUBS OF INTEREST

Beta Beta Beta Biological Society(BBB)

Tennessee Tech Student Chapter of the Society for Technical Communication(STC)



TECH COMPUTER LABS

Need to Work on Your HomePage after Hours Using FrontPage 2000, then Try:


University Computer-lab Hours 

  Online Technical Writing
Online Textbook(Contents)
   


Dictionaries

Calculators (Scientific)

Demographic Data

Google Earth

Tennessee Landforms

News Links

Biology Glossary

 

Weather? wpe7.gif (1916 bytes) 


Science in Action:

Online Searches

  • Venture (database of undergraduate research)

 Graduate School?

Catch the Time/Date  

Celestial Relationship(ppt)

Earth from Space

NASA Space Missio

 

Tennessee Tech School Colors were taken from the Purple Flowers of Ironweed and Yellow Flowers of Golden Rod growing abundantly on campus

Iron Weed (Vernoia spp.) Golden Rod (Solidago spp.)
.............................................................................................. ......................................................................................................

 Weekly Schedule 

Week

 Item

 1st Topic:  Introduction to Course / Developing a Research Project for Presentation
Discussion:
  1.  Introduction and General Information;

2. Discussion of Research Requirements;

3.  Selecting a Research Topic, Need Ideas?; Online Examples

4.  Developing the "Title:"  1, 2, 3, 4;

5.  Overview of the Research Process;

6.  Organizing your Research, the Portfolio; and

7.  Online Technical Writing: Online Textbook Resource, Essays and Research Papers.

Assignment:

  1.  Select a copy of Ecology and complete the following Task

2.  Select a Research "Topic" and "Title" for presentation in Class next week; Need Research Ideas, Help?;

3.  Visit:  Research Link 2000, Discovery, Seven Steps in the Research Process , How to Write a Research Paper ; Algae and Energy production and

4.  Read: Introduction, pp. 1-5 and Chapter 4, Writing a Research Paper, TITLE, pp. 52-55, Writing Papers in the Biological Sciences," 3rd edition, 2001


2nd   Topic:    Literature Reviews for the Research Project / Critique of Scientific Articles
Discussion:
  1.  Preliminary Literature Searches;  Try the PC Laboratory Literature Search engine SciFinder;

2.  What is a Peer-reviewed Scientific Journal Article or paper? How does the Manuscript Review Process Work

3.  The Research Process Tutorial [assigned];

4.  Database Key Word Search Tips [and how to use Boolean Logic];

5.  Using Websites for Literature Searches (Websites you can trust);

6.  Interpreting, Referencing, and Citing Publications (see Format: examples); Need Online Help, More?

              NOTE:  A LITERATURE REVIEW is Required as a Section in the Research Proposal; and

7Critique* of a Scientific Journal Article (see Attachment) or Need Online Help.; and How It's Done.

Assignment:
 

1. Preliminary Literature Review (due next week!); Cross-References, Online Help; and Interlibrary Loan Request Form.

      NOTE: Final Literature Review for the Research Project will be due Midterm (as a section in the Research Proposal);

2.  Research and Literature Search Process Assignments:

3.  Complete Critique* of your Scientific Journal Article (requirement for Mid-term); 

4.  Complete this in-class assignment today and submit to instructor:  Literature Cited? (Correct examples); 

5.  Update the Research Title; Submit a paper copy for discussion with instructor before leaving class today;  and

6.  Read: Chapter 1, "Locating and Using Biological Literature," Chapter 6, "Documenting the Paper," and Chapter 5, "Writing a Review Paper," Writing Papers in the Biological Sciences," 4th edition, 2006


 3rd Topic:    Scientific Method / Objective and Hypothesis Statements 
Discussion:   
 

1.  Understanding the The Scientific Method: 

  • A General Overview; [submit Statement of Completion to instructor before leaving class today]

  • A Summary:  Sequence of Events in the Scientific Method and use of Replications in Experimental Research;

2.  Online: "Scientific Method Explained," Scientific Method in Action and General Guide; A Guided, Do-It-Yourself Resource for Understanding the Scientific Method; A Simple Procedure and Example for Experimental Research;

3.  Developing the Research Objective and Hypothesis statements; Examples.

Assignment:
  1.  Complete a Review of "Experimental Research Project;"

2.  Using the Scientific Method* in developing your Experimental Design* 

NOTE: Both to appear in Portfolio and as a link on your Homepage for Biol 3920;

3.  State your Objective and Hypothesis (plus Null)*

  • NOTE: Both to appear in Portfolio & your Homepage for Biol 3920, and to be submitted to the instructor as a paper copy in class next week;

Evaluate your Hypothesis: What's Wrong with that Hypothesis?; Definition;

4.  A useful tool: Regression Analysis & Experimental Design;

[ Introduction; Basic statistics; Simple ANOVA; Rejection of data; Experimental design; Simple modeling;

Signal detection; Calibration; Exploration; HCA; PCA; Classification; Multivariate calibration; Neural networks] (J. K. Hardy 2005) ;

5.  Online webpage Assignment: The Scientific Method Today

6.  In-class Assignment:  You are responsible for reviewing:  "Observational Studies and "Experimental Research"? Which study requires both a "Control" and a "Treatment" group?  

7.  Interested in PC Games:  Try An Active Online Learning Demonstration of Good Experimental Design; and

8.  Seminar [ Attend any three (3) seminars this Semester ]

9.  Read: Chapter 2, "Handling Data,"  The Hypothesis Test, Null Hypothesis Test, Writing Papers in the Biological Sciences," ," 4rd ed, 2006.

Quiz:  All about Literature Searches, Citations, Online quiz      

 4th Topic:  Research Proposals /  Key Words
Discussion:
 

1.  Developing a Research Proposal* for Your Project ( Attachment);

2.  Online: "Proposal Writing Resources;"  "Technical Writing (see examples: Proposals);" "Proposal Writer's Guide"; Writing Proposals;

3.  PowerPoint Presentation: "Proposal Writing Workshop"; and,

4.  Selecting Key Words; Google for Key Words Ideas; Key Words for your WebPage; Definition... also see help for your Research Proposal and Manuscript.

Assignment:
  1.  Assigned PowerPoint Presentations: 

PROPOSAL WRITING WORKSHOP; and LITERATURE REVIEW;

2.  Write a Research Proposal* following this Format (required for Mid-term);

3.  Form Used to Evaluate Research Proposal (Evaluation Form);   

4.  Before leaving class today leave a copy with the instructor of your :

  • Objective* and Hypothesis (plus Null)* statements; 
  • Key Words*;
  • Statements of Completion ; 

5.  Assignment for next week 

  • Submit a copy of the Proposed Research Timeline* and Budget*  [for the Research Proposal] to the instructor; and,

6.   Seminar [ Attend any three (3) seminars this Semester ]

~ OR ~

  • Attend a special lecture or seminar on campus to help meet seminar requirements

7. Reed:  

  • Chapter 10, "Other Forms of Biological Writing- Research Proposals,"  Writing Papers in the Biological Sciences, 4th edition, 2006.
Quiz:  All about Scientific Method, Hypotheses Tests and Objective Statements; Online Proposal quiz

5th Topic:  Communicating-Publishing Presentations/Information on WWW Home-page
Discussion:
  1.  Designing and Developing Your Homepage for the WWW; Online Help: "General Discussion of Websites;" "Building a Website;" "Web Development Resources;" "World Wide Web Consortium (W3C)," 

2.  "Core Values;" of the Web-design Program;

3.  Online Web Design Resources: Professionals, Free Art for Web,Yahoo WebPage Design: Layout and Graphics, Web Developers Resource on: WebMonkeyWEB STYLE GUIDE, 2nd edition,  WebPage Design Digital Library

4.  Webpage Design Flaws

5.  Using FrontPage for Your Hypertext Toolbox [Tech Tutorials]

6.  Try our new Hypertext Tool Box: DreamWeaver (go to START, Macromedia Studio 2004)

Exercise: 

  1.  Use FrontPage 2000, DreamWeaver, or Web-provider tools to Develop Your Homepage (in HTML);

2.  Publishing Your Website: TriPod (See Andrew's  Short-cut; and Dean's Sure-fire way!); Sarah's GeoCities; Dana's Angelfire; or try  FreeWebs; Webs.com; More Sites see: Google.com;

3.  Examples: http://members.tripod.com/ttubiol392; http://sharon38556.tripod.com/index.htmAndrew Williamson.

Assignment:  
  1.  Review and following the guidelines given in:

2.  Develop a Homepage, Tech Activities page, and a Biological Communications (Biol.3920) page with Hyperlinks to each Assignment; Post on the WWW.

3.  Seminar [ Attend any three (3) seminars this Semester ]

Quiz:  All about Research Proposals / Key Words / Objective and Null Hypothesis Test

 6th Topic:  Data Forms /  Mid-term Outline of Proposal in PowerPoint
Exercise                     
 

1.  Developing a Data Form* for Recording Your Research Data in Word:

2.  Developing Tables and Figures for Presentation Example: [Tables; Fig. 1, 2]; Reading Assignment: Attachment; See Online Tables & Figures

3.  Using PowerPoint for Research Proposal Presentations: IntroductionIntermediate;

4.  Some Basic Statistics Recommended for Processing Your Research Data;

  •  Remember to identify in the Proposal/Midterm what statistics you plan to use;

5.  Online: Presentation Assistants; Effective Presentations; Presentation Tool Software Download  Presentation Assistant onTinderbox Public File Exchange; PowerPoint- Effective Presentation; Professional Presentation Resource; BBC Modules Helpful to Communication skills; Talk Good: Giving Effective Presentations; and

6.  Online links to National Organizations of Communications.

Assignment: 
  1.  Design a Data Form*(why the Data Form is Important);

2.  Also Required in the Research Proposal*: Reference to Statistics you will use... 

3.  Midterm Slide Design  (see Slide Tips); Need help with slides? (see http://www.photo.tntech.edu/);

4.  Mid-term Presentation: Develop Slide-by-slide PowerPoint* Outline of Your Research Proposal;

  • Submit a paper copy to the instructor before leaving the PC lab today;

5.  Practice Mid-term PowerPoint Presentation* using the PROXMA; 

6.  Seminar [ Attend any three (3) seminars this Semester ]

7.  Read

  • Chapter 2, "Handling Data,"  Chapter 4, "Writing a Research Paper,"  Writing Papers in the Biological Sciences, , 4th ed, 2006; and

  • Hartman,J.L.J., and E.A.LeMay. 2001. Presentation Success: A step-by-step approach, South-Western Publ., Ohio
Quiz: All about FrontPage Attachments and Links

 7th Mid-term Examination
Exercise:  
  1.  First Platform Presentation... Proposed Research; and

2.  Form Used to Evaluate Mid-term PowerPoint Presentation of Research Proposal: Evaluation form.

Assignment:  
  1.  Summary of Mid-term Examination: Both Written and Platform  Requirements; 

2.  Check that Hypothesis;

3.  Make copies of each of the following for submitting to instructor next class meeting (Week 9):  Written; and,

4. Online Oral (Platform) Presentation quiz


 8th SEMESTER  BREAK

 9th Topic:  Written Midterm Requirements/Summary of Manuscript Format Requirements
Exercise:   You are responsible for completing each Task in items 3, 4, 5, and 6 below.                   
1.  Meeting the Requirements of a Specified Format for Your Manuscript                                    

2.  Visit the Online Technical Writing Course/Text Book, lots of good information;

3.  Writing the Abstract [Online Help; More, How to Write One] - Key Words, Introduction, Conclusions- Online Help

4.  Online  Tables, Figures

5.  Using an Appendix for Raw Data Tables, see Format Example; and

6.   Submit Written Midterm Requirements: Research Proposal*, Critique of Journal Article*, Data Form*, etc.;

Assignment:: You are responsible for completing each Assignment in 1, 2, and 3.

1.  Know the General Organization of the Manuscript and Specific Format of Manuscript... 

Evaluation Form Used by the Instructor to Grade Your Manuscript [with Format Summary Includes]
  • Need help in Writing: See Example 1, 2 ;
  • NOTE: 1st Page of EACH Journal Article Cited in the Manuscript is to Accompany (submitted with) final manuscript; 

2.  Due Next Week:   In the Library select a copy of Ecology and complete the following Assignment (Table and Figure Matrix*); Submit a paper copy to the Instructor Next Week;

3.  Seminar [ Attend any three (3) seminars this Semester ]

4.  Read

  • Chapter 3, "Using Tables and Figures," pp. 45 - 67; and Chapter 6, "Documenting the Paper," pp. 137-166, Writing Papers in the Biological Sciences, 3rd edition, 2001.
Quiz:  None


10th Topic:  Platform Presentation  / Robert's Rules 
Discussion:  Developing Skills for the Platform Presentations                      
  1.  Remember:  Literature Cited Requirement (i.e. copy of Journal Article Cited Required);

2.  So You're Going to Present a Scientific Paper! (requires Statement of Completion);

3Online Oral Platform ResourceExample: (Power Point Presentation);

4.   Designing Effective Visual Aids for Presentations

5.  Required Pics for Your Presentation;

6.  Tips for Good Presentations: Slide Design  (see Slide Tips); Some Hints ; 15 Pointers; and,

7Parliamentary Procedures:  Robert's Rules of Order; Now it is used .

Assignment:
 

1.  Develop an Outline of your Research as a Final Platform (Oral) Presentation* in PowerPoint; 

2.  Submit a paper copy of your Platform (Oral) Presentation* Outline to the Instructor before leaving the PC lab today; be sure to include a list of proposed Pics;  Remember to place a copy in your Portfolio;

3.  Exercising the procedures of Robert's Rules; be prepared to preside over a meeting as Chairperson;

4.  Seminar [ Attend any three (3) seminars this Semester ]

                                       OR

  • Attend a Special Presentation hosted by the Student Fisheries Association

Topic:   "Threatened and Endangered Fish Propagation"

By:  Conservation Fisheries Inc.

Time/Location:   Wednesday the 4th of November at  4 P.M. in Room 128. Pennebaker Hall

  •  Attend a presentation sponsored by Livingston Academy

Topic:  "The Body Farm"

By:  Dr. William Bass, Professor Emeritus, University of Tennessee, Knoxville, TN

 Time/Location:  Thursday the 12th of November, Livingston Academy High School at 7:00 P.M. 

Admission Price:  $10.00, tickets available in the Biology office if you would like to purchase one.

5.  Read:  

  • Chapter 10, "Other Forms of Biological Writing- Oral Presentations", pp. 215-252, Writing Papers in the Biological Sciences, 4th edition, 2005; and
  • Hartman,J.L.J., and E.A.LeMay. 2001. Presentation Success: A step-by-step approach, South-Western Publ., Ohio
Quiz:  All about PowerPoint Presentations;  Developing and Presenting your Résumé

11th Topic:   Developing a Résumé or Curriculum Vitae (C.V.) Bioethics and Integrity in Science 
Discussion:  Designing a Résumé* or Curriculum Vitae (C.V); Developing a Bioethics Statement* 
  Resume  

1.  Read Chapter in Handbook on Résumé and Curriculum Vitae (C.V.), see pgs. 187-99);

2.  Examples of Résumé and Short C.V.: Flipdog ; Monster.com; Resumania.com; 10_Minute_Resume_Online; How to Write; Samples; JobStar_Tips; Resume_WorkShops; Resume_Resource;

3.  Formats and Templates for Your Résumé;  Helpful Suggestions

4.  RésuméTutor; Templates, and Power Words [start your sentance/bullet with a Punch] ;

5.  The Career Portfolio; and

Bioethics

1.  President's Council on Bioethics; The American Journal of Bioethics, Other Journals on Bioethics; Kennedy Institute of Ethics Journal; Journal of the International Association of Bioethics; National Institute of Health (Bioethics); and,

2.  Information for Developing Your Ethic Statement (See Link); Ethics in Biological Science More Help.

Assignment:                 

1.  Develop your own Résumé  

 and Ethic Statement; Include copies in your Portfolio and Post on Web-page; 

    Before leaving the PC lab today submit a "draft outline" of the Résumé and the Bioethics statement to the Instructor;

2.  Heads-up on Webpage Requirements (Final Evaluation on Week 14... be there!); 

3.  Seminar [ Attend any three (3) seminars this Semester ]

4.  Return Midterm and Make Corrections in Research Proposal for Extra Credit, and;

5.  Read

  • "Résumés," pp.187-192, Writing Papers in the Biological Sciences, 3rd ed., 2001  
Quiz: All about Ethics and Integrity in Science

12th Topic:  Designing a Poster / Evaluating-critiquing Your  Manuscript 
Discussion:
 

1.  Laboratory: Design a Poster Presentation with Images/Graphics; Poster Design ;

2.  Online Examples of Posters (from Soc. Envir. Tox, & Chem., Prague, 2004); and,

3.  Using Outside Evaluations-Critiques to Improve Manuscript, Need OnLine Help

Assignment:  
  1.  Complete the Short-course on Posters before continuing;

2.  Critique five (5) Posters from the many presented in Lab [see Poster Critique Forms]; 

3.  Design a Poster*(Example: Poster Set-up);

4.  Evaluating the Poster: form used by instructor to grade your Poster (See Poster Evaluation);

5.  Submit a DRAFT copy of your Poster set-up in the 8 X 11" format to the instructor  before leaving class today .

6.  Select three (3) individuals to Proof/Critique your Manuscript;

7.  Seminar [ Attend any three (3) seminars this Semester ]

OR  ~

8Read: Chapter 10, "Other Forms of Biological Writing- "Poster Presentations" pp. 174-175, Writing Papers in the Biological Sciences, 3rd edition, 2001.  

Quiz: All about Platform Presentations

13th Topic:   Writing a Research Progress Report (RPP) / Final Platform Presentation Outline
Discussion:
 

1.  What is a "Research Progress Report*"- Online Help?; 

2.  Recommended Slides for Final PowerPoint Platform Presentation;

3.  Example of a Good Platform Presentation [Seminar]; 

4.  NoteForm used by instructor to make Final Evaluation of Your Manuscript.

5.  Final Platform Presentations from Group 1 [Early-birds].

Assignment:
 

1.  You are Responsible for the Lecture Materials given last week in: Poster Presentations;

2.  Complete the Review of Progress Report and what it is all about

3.  Prepare a written Progress Report of your research (giving the status or progress to date, i.e. Final Progress Report), leaving a copy with the instructor before leaving class today; 

4.  Interested in Extra Credit [2%]?:  Participate in Two [2] Online Seminars, Complete a Seminar Evaluation Form for each and post on your webpage / place copy in Portfolio; and

5.  Seminar [ Attend any three (3) seminars this Semester ]

OR  ~

Quiz:  All about Poster Presentations ; Progress Report Online quiz

14th Topic:  ONLINE  RESEARCH  ETHICS  COURSE and  RFP/RFA or Fellowship* and Webpage Evaluation
Discussion:  
  Early-bird Special:  Take Advantage of this Opportunity of Giving Final Platform Presentations of Your Research  Today.

1.  Overview of Research Ethics Course, Ethical Issues in Research;

2.  All About the Request for Proposals Process and Understanding the RFP/RFA and Fellowship Application* process;

3.  Webpage Requirements; and,

4Complete the 1st Draft of Written Manuscript.

Assignment:  
  1.  Complete the Research Ethics Course on Ethical Issues in Research, completing the Section Assessment and Certificate;
  • Place a copy of the Certificate in your Portfolio

2.  Complete an  EPA-Undergraduate Fellowship Application*(see Procedure); 

      or

      the RFP/RFA Process - (Request for Proposals/Request for Applications*) ... NOT BOTH.

3.  Final Webpage Evaluation (the instructor will meet with you individually to review you Webpage);

4.  Submit 1st Draft of Manuscript to Peer Review folks (select three[3] outside reviewers; have them "mark-up" the draft [to be included in Portfolio] ; Make corrections on original manuscript);

5.  Recommended Slides for Final PowerPoint Platform Presentation; and,

6Seminar [ Attend any three (3) seminars this Semester ]

OR  ~

7.   Read  Chapter 10, "Other Forms of Biological Writing- Research Proposals," pp.175-183, Writing Papers in the Biological Sciences, 3rd edition, 2001.

8.   Review:  Chapter 8, "Preparing the Final Draft of the Manuscript," pp. 152-160; and Chapter 10, "Other Forms of Biological Writing- Oral Presentations", pp. 170-174, Writing Papers in the Biological Sciences, 3rd edition, 2001; and

Hartman,J.L.J., and E.A.LeMay. 2001. Presentation Success: A step-by-step approach, South-Western Publ., Ohio

Quiz:  Platform and Poster Presentations: see Poster Presentation; Online Abstract quiz

15th Topic:   Final Platform Presentations* / Manuscript Format
Discussion:
 

1.  Is Your Final Manuscript in the Correct Format!

  • Check that Abstract... does it meet these Requirements? For Example does it have:
    • THE TITLE IN UPPER CASE above the Abstract.?
    • Following the TITLE, is the first Name, Middle Initial, and Last Name of the Author given; address?
  • Outside Evaluations-Critiques to Improve Manuscript
    • Be sure to include the three (3) Outside Evaluation-Critiques with the Final Draft of the Manuscript in the Portfolio.

2.  NoteForm used by instructor to make Final Evaluation of Your Manuscript.

Assignment:  
  1.  Final Platform Presentations of the Results of Your Research.

2.  Complete an Evaluation of Each Presentation; and

3.  Submit Final Draft of Written Manuscript* and Completed Portfolio to Instructor at beginning of Final Examination secession.

4Seminar [ Attend any three (3) seminars this Semester ]

OR  ~

  • Attend a Special Presentation  

To be Posted [if any]

OR  ~



16th

Final Examination 
 
Sec. 001 [Wednesday at 1:25 - 4:15 P.M.]: 1:00 - 3:00 P.M .on Monday, 14 December 2009 in Biology PC Lab [PR-211]
Sec. 002 [Wednesday at 4:40 to 7:30 P.M.] 6:00 - 8:00 P.M. on Friday, 11 December 2009 in Biology PC Lab [PR-211]
    University Final Examination Schedule (all classes)

Return

Eric L. Morgan

Office: PR 110

Telephone: 615/372-3401

e-mail: ELMorgan@TnTech.edu


Scholarship & Grants  Fellowship

 
Last updated 04 November, 2009

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